Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007014.1 Corchorus capsularis cultivar CVL-1 contig07035, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19792

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2945--3017
33
2.2
33
78
4
85
15
30
42
12
1.83
3069--3228
33
4.9
33
92
1
225
11
31
41
15
1.83
4676--4723
15
3.1
15
72
16
53
25
25
6
43
1.77
5977--6008
12
2.7
12
95
0
55
12
15
15
56
1.68
7236--7319
29
2.9
29
90
0
132
25
27
25
22
2.00
13227--13261
8
4.4
8
88
0
52
82
0
17
0
0.66
13220--13261
22
1.9
22
85
9
59
80
2
16
0
0.81

Tables:   1

The End!