Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007015.1 Corchorus capsularis cultivar CVL-1 contig07036, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17398

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--298
38
7.8
38
78
1
249
34
14
18
33
1.91
3--298
114
2.6
114
82
2
335
34
14
17
33
1.91
2924--2952
13
2.1
14
93
6
51
72
0
20
6
1.07
7750--7784
18
2.1
18
89
10
56
37
11
5
45
1.64
11816--11846
16
1.9
16
93
0
53
67
9
16
6
1.39
14570--14626
2
28.5
2
81
0
69
47
0
0
52
1.00
15039--15074
14
2.8
13
91
8
56
44
8
2
44
1.48
16720--17184
38
12.2
38
77
8
349
34
14
19
31
1.92
16720--17171
76
5.9
76
78
4
437
33
15
19
32
1.93
16717--17193
114
4.2
113
82
4
537
34
15
19
31
1.92

Tables:   1

The End!