Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007016.1 Corchorus capsularis cultivar CVL-1 contig07037, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27834

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1148--1200
21
2.6
21
84
3
63
7
33
30
28
1.85
1582--3200
38
42.2
38
78
4
1327
33
16
20
29
1.94
4863--4903
14
2.9
14
85
0
55
82
2
14
0
0.76
7722--7781
25
2.4
25
83
10
86
20
31
30
18
1.96
8265--8331
22
3.0
22
70
10
55
64
8
7
19
1.46
20793--20828
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!