Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007022.1 Corchorus capsularis cultivar CVL-1 contig07043, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14255

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--230
22
10.6
21
67
16
110
35
14
7
41
1.75
17--141
44
2.8
44
84
4
135
37
12
8
42
1.71
270--390
22
5.5
22
75
5
93
33
14
10
41
1.81
249--373
44
2.8
44
74
4
126
33
13
10
42
1.78
249--390
44
3.2
43
73
9
117
33
13
11
42
1.80
11908--11965
27
2.1
28
83
3
73
48
5
8
37
1.56

Tables:   1

The End!