Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007026.1 Corchorus capsularis cultivar CVL-1 contig07047, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15629

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
832--869
19
2.1
18
90
5
58
28
21
2
47
1.64
2070--2628
278
2.0
278
98
0
1082
26
24
16
32
1.96
8732--8819
43
2.0
43
100
0
176
27
20
9
43
1.82
8984--9039
28
2.0
28
100
0
112
32
21
7
39
1.80
11472--11517
2
24.5
2
87
12
71
52
0
0
47
1.00
11472--11517
11
4.1
12
86
13
71
52
0
0
47
1.00
15198--15235
2
19.0
2
94
0
67
47
0
0
52
1.00
15222--15307
42
2.0
42
93
0
145
39
11
16
32
1.84

Tables:   1

The End!