Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007030.1 Corchorus capsularis cultivar CVL-1 contig07051, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44817

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6203--6246
15
2.9
15
82
0
52
43
20
22
13
1.87
26874--26902
2
14.5
2
100
0
58
51
0
0
48
1.00
33637--33672
18
1.9
19
88
5
56
11
33
0
55
1.35
39371--39459
46
1.9
46
93
0
151
38
8
22
30
1.85
40474--40534
25
2.5
25
83
2
79
36
16
13
34
1.87
40474--40541
24
2.8
25
81
2
84
36
16
11
35
1.85
43367--43505
46
3.0
46
88
0
188
31
15
20
31
1.94
44045--44146
45
2.3
45
87
3
152
30
16
26
26
1.97
44061--44167
45
2.4
45
84
3
126
28
17
27
27
1.98

Tables:   1

The End!