Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007034.1 Corchorus capsularis cultivar CVL-1 contig07055, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29662

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1323--1356
8
4.1
8
85
7
50
23
2
14
58
1.50
2261--2335
33
2.3
33
81
4
89
6
26
42
24
1.79
6098--6141
21
2.2
20
83
4
52
20
43
20
15
1.88
8629--8659
15
2.1
15
100
0
62
58
0
12
29
1.35
13447--13505
23
2.6
23
81
5
66
61
10
10
18
1.56
13484--13520
19
1.9
19
94
0
65
59
10
8
21
1.56
16162--16197
12
3.0
12
91
0
54
52
8
11
27
1.65
22363--22399
19
1.9
19
94
0
65
59
10
8
21
1.56
26153--26242
26
3.3
26
70
19
76
25
16
6
51
1.69
26182--26271
29
3.2
29
66
20
82
24
17
8
48
1.75
26156--26582
55
7.8
55
90
2
660
25
18
7
48
1.75
26637--26671
15
2.3
15
90
0
52
22
17
8
51
1.72
26652--26713
33
1.9
32
83
9
81
19
19
8
53
1.69
26571--26803
22
10.5
22
69
15
108
19
21
6
53
1.66
26849--26918
31
2.3
30
80
2
86
25
12
8
52
1.67

Tables:   1

The End!