Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007037.1 Corchorus capsularis cultivar CVL-1 contig07058, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21210

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9991--10050
24
2.5
24
91
0
93
53
3
13
30
1.56
11338--11389
27
1.9
27
84
0
68
32
34
1
30
1.69
12859--12926
33
2.1
33
97
0
127
22
14
7
55
1.63
13857--13913
30
1.9
30
89
7
89
22
26
17
33
1.96
19455--19524
34
2.1
34
94
0
122
32
11
4
51
1.57
19763--19828
33
2.0
33
96
0
123
31
12
12
43
1.78
21137--21210
2
37.0
2
100
0
148
50
0
50
0
1.00

Tables:   1

The End!