Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007041.1 Corchorus capsularis cultivar CVL-1 contig07062, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47180

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1534--1571
11
3.5
11
92
7
60
63
18
2
15
1.43
8274--8314
21
2.0
21
85
0
55
39
9
21
29
1.86
12208--12324
39
3.0
38
81
5
135
41
30
11
17
1.84
15182--15215
11
3.2
10
84
15
50
29
2
17
50
1.61
21911--21944
11
3.2
10
84
15
50
29
2
17
50
1.61
32673--32713
21
2.0
21
85
0
55
39
9
21
29
1.86
35367--35406
21
1.9
21
84
0
53
30
22
20
27
1.98
43214--43245
15
2.0
17
88
11
50
25
0
0
75
0.81
43771--43865
40
2.5
38
88
8
131
47
8
17
26
1.76

Tables:   1

The End!