Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007042.1 Corchorus capsularis cultivar CVL-1 contig07063, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48023

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
831--865
2
17.5
2
100
0
70
48
0
0
51
1.00
2004--2035
2
16.0
2
100
0
64
50
0
0
50
1.00
2667--2744
40
2.0
40
100
0
156
48
12
15
23
1.79
3022--3178
74
2.1
74
87
0
233
22
26
9
42
1.84
7059--7088
2
15.0
2
100
0
60
50
0
0
50
1.00
8470--8501
2
16.0
2
100
0
64
50
0
0
50
1.00
15767--15814
24
2.0
24
95
0
87
33
27
0
39
1.57
20619--20652
2
17.0
2
93
0
59
52
0
0
47
1.00
47874--47911
18
2.1
18
95
0
67
39
0
39
21
1.53

Tables:   1

The End!