Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007050.1 Corchorus capsularis cultivar CVL-1 contig07071, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39081

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4308--4351
22
2.0
22
95
0
79
20
13
38
27
1.90
4877--4944
34
2.0
34
100
0
136
38
11
23
26
1.89
18126--18175
17
2.9
17
90
0
73
26
16
36
22
1.94
27695--27771
38
2.0
38
94
0
136
35
15
12
36
1.86
32050--32527
30
15.7
30
87
2
517
33
16
16
33
1.92
32050--32527
60
7.8
60
88
1
578
33
16
16
33
1.92
32050--32497
121
3.7
121
88
2
567
33
16
16
33
1.91

Tables:   1

The End!