Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007055.1 Corchorus capsularis cultivar CVL-1 contig07076, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20726

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2422--2455
14
2.4
14
95
0
59
50
14
11
23
1.76
2780--2854
27
2.8
27
77
0
87
49
25
10
14
1.76
5848--6123
90
3.1
88
85
4
354
39
14
25
20
1.90
13737--13762
8
3.2
8
100
0
52
34
23
0
42
1.54
14175--14386
109
1.9
109
89
1
327
38
8
20
33
1.82
14846--15236
133
3.0
132
85
1
500
36
13
17
33
1.89
14921--15257
130
2.6
131
86
1
435
37
14
17
30
1.90
16651--16700
22
2.2
22
78
3
55
26
10
8
56
1.60
16791--16839
21
2.3
21
80
16
57
32
12
12
42
1.79
18236--18299
31
2.1
31
100
0
128
48
12
3
35
1.57
18267--18344
39
2.0
39
97
0
147
44
16
5
33
1.70

Tables:   1

The End!