Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007059.1 Corchorus capsularis cultivar CVL-1 contig07080, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19985

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7877--7935
30
2.0
30
86
6
84
22
33
13
30
1.92
9015--9073
30
2.0
30
90
6
93
20
28
18
32
1.96
11172--11280
33
3.3
33
96
0
191
44
18
10
26
1.81
11305--11401
33
2.9
33
81
0
122
45
21
8
24
1.79
17686--17810
33
3.8
32
84
8
117
9
26
42
21
1.83
17723--17830
33
3.3
33
82
7
130
8
28
42
20
1.81
19576--19691
33
3.6
33
82
3
139
39
17
9
33
1.82
19707--19811
33
3.2
33
83
2
140
45
19
9
25
1.80

Tables:   1

The End!