Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007064.1 Corchorus capsularis cultivar CVL-1 contig07085, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28582

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2829--2872
21
2.1
21
86
0
61
34
6
2
56
1.38
4342--4387
15
3.0
15
87
6
74
26
6
23
43
1.78
4342--4386
16
2.9
16
90
3
74
24
6
24
44
1.77
6831--6903
34
2.1
34
84
0
92
41
6
6
45
1.57
6887--6931
13
3.5
13
81
6
56
44
11
2
42
1.52
7015--7105
44
2.1
42
90
8
139
38
8
0
52
1.33
8034--8106
33
2.2
33
97
0
137
32
9
16
41
1.81
11285--11371
24
3.6
24
90
0
129
27
20
24
27
1.99
15137--15173
16
2.4
16
90
4
58
16
13
27
43
1.85
20376--20429
21
2.6
21
85
8
76
11
14
9
64
1.48
21458--22397
439
2.1
439
88
4
1389
42
17
12
26
1.86
22782--23921
441
2.6
444
83
5
1322
27
13
17
42
1.87
24133--24177
21
2.3
21
85
11
60
60
11
4
24
1.49
27591--27633
21
2.0
21
100
0
86
51
13
4
30
1.62

Tables:   1

The End!