Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007077.1 Corchorus capsularis cultivar CVL-1 contig07098, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37070

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5214--5288
27
2.7
27
81
2
96
44
24
10
21
1.84
8269--8304
19
1.9
18
88
5
54
33
22
2
41
1.68
13023--13055
14
2.4
14
90
5
50
57
6
6
30
1.47
14836--14875
22
1.9
20
85
10
53
42
15
12
30
1.83
20310--20334
10
2.5
10
100
0
50
8
0
20
72
1.10
26144--26180
19
2.0
18
89
5
56
40
8
21
29
1.82
27674--27719
18
2.6
18
85
0
65
10
8
10
69
1.37

Tables:   1

The End!