Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007078.1 Corchorus capsularis cultivar CVL-1 contig07099, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22058

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1529--1624
27
3.6
26
84
5
113
40
25
15
18
1.90
2529--2647
41
2.9
41
91
0
184
38
12
22
26
1.90
3859--3907
21
2.3
21
92
0
80
36
8
20
34
1.82
4004--4048
23
2.0
23
82
8
56
31
2
2
64
1.18
4127--4169
14
3.4
14
75
24
58
72
6
0
20
1.08
4133--4176
12
3.8
11
80
11
52
75
6
0
18
1.02
6223--6301
40
2.0
40
92
0
131
39
3
29
27
1.74
8732--8800
30
2.3
30
85
7
88
28
10
23
37
1.87
14034--14062
2
14.5
2
100
0
58
0
48
0
51
1.00
19161--19200
6
6.7
6
94
0
71
30
17
15
37
1.90

Tables:   1

The End!