Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007091.1 Corchorus capsularis cultivar CVL-1 contig07112, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18384

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
358--464
32
3.3
32
82
2
144
26
25
17
30
1.97
1520--1544
9
2.8
9
100
0
50
48
12
0
40
1.40
1901--1948
16
3.1
15
85
8
62
64
14
8
12
1.49
1886--1926
20
2.1
19
86
4
55
58
14
9
17
1.62
3489--3528
21
1.9
21
94
0
71
52
15
10
22
1.71

Tables:   1

The End!