Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007093.1 Corchorus capsularis cultivar CVL-1 contig07114, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18720

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2478--2582
33
3.2
32
83
5
129
20
41
29
8
1.81
2495--2619
33
3.8
32
83
8
108
21
41
26
10
1.85
8735--8887
75
2.0
75
98
0
297
39
18
9
32
1.82
10443--10509
21
3.2
21
70
16
66
34
23
11
29
1.91
11655--11692
20
1.9
20
94
0
67
31
7
26
34
1.85
12684--12724
21
2.0
21
85
0
55
29
21
9
39
1.86
17371--17420
21
2.3
21
82
3
55
42
16
28
14
1.86

Tables:   1

The End!