Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007097.1 Corchorus capsularis cultivar CVL-1 contig07118, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19975

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
617--660
21
2.1
21
83
8
54
18
27
9
45
1.79
962--1035
32
2.3
32
88
4
105
16
41
33
8
1.77
1026--1142
33
3.5
33
84
2
137
13
30
37
17
1.89
2302--2363
31
2.0
31
93
0
106
27
20
8
43
1.80
2849--2873
13
1.9
13
100
0
50
16
16
0
68
1.22
7238--7295
30
1.9
30
100
0
116
41
1
10
46
1.48
7615--7673
31
1.9
31
85
0
82
42
8
18
30
1.80
7739--7768
3
10.0
3
100
0
60
66
0
0
33
0.92
7935--8039
42
2.5
42
95
1
183
35
36
7
20
1.82
9357--9400
22
2.0
22
90
0
70
31
31
18
18
1.95
9075--9576
249
2.0
249
95
1
909
35
15
18
29
1.92
11412--11596
38
4.9
38
91
0
264
24
37
17
20
1.94
19158--19246
44
2.0
44
84
6
115
26
12
16
43
1.84

Tables:   1

The End!