Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007098.1 Corchorus capsularis cultivar CVL-1 contig07119, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25235

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4220--4270
17
3.1
16
86
8
66
21
21
21
35
1.96
7479--7520
21
2.0
22
95
4
77
2
28
38
30
1.70
7573--7628
15
3.4
18
72
25
61
50
0
0
50
1.00
11393--11441
24
2.0
24
100
0
98
40
16
4
38
1.67
15019--15088
36
1.9
36
88
0
104
41
7
15
35
1.75
15015--15096
36
2.3
35
81
6
101
45
8
13
32
1.74
20400--20804
145
2.8
142
92
3
650
29
16
13
40
1.87
20695--21107
166
2.5
166
88
3
587
29
14
16
39
1.88
21561--21594
15
2.2
16
89
5
52
41
2
5
50
1.42
21848--22020
77
2.2
78
82
6
201
25
13
34
26
1.93
21832--22020
38
4.9
37
75
11
157
24
15
34
25
1.95
22049--22074
6
4.3
6
100
0
52
15
0
34
50
1.45
24987--25044
3
20.7
3
77
13
52
62
0
5
32
1.18

Tables:   1

The End!