Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007104.1 Corchorus capsularis cultivar CVL-1 contig07125, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17575

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5153--5199
23
2.1
23
84
11
62
34
19
4
42
1.70
6029--6075
24
1.9
24
82
4
58
53
2
17
27
1.55
12578--12701
66
1.9
66
83
6
162
34
8
19
37
1.81
12560--12936
22
17.0
22
68
16
134
40
9
16
33
1.81
12729--12961
44
5.3
44
69
15
135
43
9
14
31
1.78
13042--13602
22
25.7
22
68
14
193
39
10
14
35
1.79
13101--13311
106
2.0
106
79
3
228
39
9
15
36
1.79
17503--17575
2
36.5
2
100
0
146
49
0
50
0
1.00

Tables:   1

The End!