Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007107.1 Corchorus capsularis cultivar CVL-1 contig07128, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16256

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5461--5589
16
8.1
16
76
5
127
10
20
34
34
1.87
5467--5599
32
4.2
32
86
2
162
10
19
36
33
1.86
6457--6519
9
7.8
8
72
21
51
9
22
38
30
1.86
6450--6543
16
5.9
15
76
8
89
9
23
36
30
1.87
6450--6560
32
3.5
31
77
9
109
9
23
36
29
1.87
6439--6543
48
2.2
48
80
13
126
10
22
34
32
1.88
6451--6560
48
2.3
48
80
10
111
10
23
37
29
1.87
7979--8060
29
2.7
30
84
5
112
24
21
15
37
1.93
14694--14726
6
5.5
6
92
0
57
27
0
18
54
1.44
15107--15182
36
2.1
38
87
9
113
28
10
2
57
1.45
15119--15197
36
2.2
36
82
8
90
29
11
3
55
1.52

Tables:   1

The End!