Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007111.1 Corchorus capsularis cultivar CVL-1 contig07132, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16120

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1947--2248
152
2.0
152
99
0
595
27
14
23
35
1.93
5371--5425
12
4.5
12
84
4
74
38
14
20
27
1.91
5371--5425
25
2.2
24
90
3
83
38
14
20
27
1.91
6490--6534
3
15.3
3
95
4
83
33
35
0
31
1.58
6532--6562
15
2.1
15
100
0
62
16
25
25
32
1.96
7488--7523
10
3.6
10
96
0
63
30
5
22
41
1.76
7792--7832
17
2.4
17
88
8
57
36
24
17
21
1.94
8010--8116
51
2.1
51
89
0
160
28
12
8
51
1.68
8600--8646
2
24.5
2
91
8
80
51
0
0
48
1.00
8601--8645
15
3.0
15
100
0
90
53
0
0
46
1.00

Tables:   1

The End!