Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007114.1 Corchorus capsularis cultivar CVL-1 contig07135, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32529

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
548--587
20
2.0
20
85
0
53
5
7
37
50
1.53
2503--2556
27
2.0
26
82
10
65
31
0
0
68
0.90
2503--2558
29
1.9
29
82
7
69
33
0
0
66
0.92
3062--3140
31
2.5
31
81
2
95
21
25
17
35
1.95
3227--3287
32
1.9
32
89
0
95
39
21
22
16
1.92
4146--4209
11
6.2
11
70
26
59
40
12
14
32
1.83
4146--4204
19
3.0
19
92
5
91
40
11
13
33
1.81
30844--30913
36
2.0
34
86
5
95
50
7
11
31
1.65
30844--30913
35
2.0
35
83
5
88
50
7
11
31
1.65

Tables:   1

The End!