Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007124.1 Corchorus capsularis cultivar CVL-1 contig07145, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36583

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7939--7966
2
14.0
2
100
0
56
50
0
0
50
1.00
10242--10303
30
2.1
30
87
3
90
17
3
16
62
1.45
13013--13073
32
1.9
32
86
0
86
40
9
9
39
1.72
13216--13372
22
7.2
22
73
14
114
35
13
11
39
1.81
13324--13402
21
3.7
21
81
3
86
26
13
10
49
1.74
13340--13425
42
2.1
41
80
6
93
25
12
6
54
1.63
16357--16385
2
14.5
2
100
0
58
51
0
0
48
1.00
17306--17332
8
3.4
8
100
0
54
62
0
0
37
0.95
18727--18761
7
5.1
7
93
3
54
85
0
14
0
0.59
21872--21917
20
2.3
20
78
17
51
36
15
21
26
1.93
23132--23161
14
2.1
14
100
0
60
30
20
6
43
1.77
24660--24700
21
2.0
21
85
0
55
14
26
24
34
1.94
30304--30338
16
2.2
16
90
10
54
0
14
2
82
0.77
30877--30952
27
2.8
27
89
0
107
38
26
18
17
1.92
35256--35283
9
3.1
9
100
0
56
32
35
0
32
1.58

Tables:   1

The End!