Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007130.1 Corchorus capsularis cultivar CVL-1 contig07151, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15841

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1493--1838
138
2.5
138
84
3
437
43
8
10
36
1.71
1828--1876
22
2.2
22
100
0
98
48
8
12
30
1.69
2191--2500
141
2.2
139
89
5
477
43
10
8
37
1.70
5468--5796
141
2.4
141
90
3
515
42
9
9
38
1.70
5858--5967
27
4.4
27
76
21
123
15
13
13
57
1.66
5866--5962
45
2.2
45
96
0
176
14
14
15
55
1.69
5893--5936
18
2.4
18
100
0
88
13
15
18
52
1.75
7393--7437
21
2.1
22
84
12
58
17
35
8
37
1.81
7474--7650
33
5.4
33
88
1
203
18
41
29
10
1.84
7474--7691
66
3.3
66
83
3
217
17
39
32
10
1.83
8065--8106
7
6.3
7
83
10
61
52
0
0
47
1.00
8060--8101
20
2.2
19
95
4
75
47
0
0
52
1.00
8130--8159
11
2.7
11
94
0
51
40
36
16
6
1.75
14694--14761
22
3.1
22
97
0
127
17
16
23
42
1.88

Tables:   1

The End!