Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007139.1 Corchorus capsularis cultivar CVL-1 contig07160, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29012

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10236--10298
31
2.0
31
87
6
92
26
20
19
33
1.96
13257--13301
21
2.1
21
83
0
54
17
31
11
40
1.85
13687--13732
15
2.9
16
81
12
60
50
6
28
15
1.69
13985--14016
2
15.5
2
93
6
55
50
3
0
46
1.17
16348--16386
2
20.0
2
94
5
71
51
0
0
48
1.00
17603--17630
2
14.0
2
100
0
56
50
0
0
50
1.00
22648--22711
28
2.3
27
76
5
65
59
25
7
7
1.52
24394--24426
9
3.6
9
92
8
57
9
21
0
69
1.15
24394--24428
10
3.6
10
84
7
54
8
22
0
68
1.16
25722--25757
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!