Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007144.1 Corchorus capsularis cultivar CVL-1 contig07165, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6331

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
691--754
33
2.0
32
84
9
85
10
4
6
78
1.08
1340--1402
8
7.9
8
77
7
65
47
3
19
30
1.64
1337--1405
16
4.3
16
78
7
86
49
2
20
27
1.63
1340--1403
24
2.7
24
82
0
92
46
3
20
29
1.66
1384--1517
58
2.3
56
82
9
171
43
8
20
27
1.81
1487--1793
22
14.0
22
74
13
148
45
4
21
29
1.70
1541--1734
36
5.2
36
83
9
244
45
3
22
28
1.69
1495--1734
80
3.1
78
85
6
314
45
4
21
29
1.70
1527--1764
58
4.1
58
81
7
304
45
4
22
28
1.71
1830--1939
8
14.1
8
69
16
63
48
2
21
27
1.64
1833--1879
24
2.0
24
91
0
76
46
4
25
23
1.70
1952--1984
16
2.1
16
88
11
50
51
0
15
33
1.43
1896--2023
53
2.4
53
88
5
195
49
2
20
28
1.61
3799--3850
14
3.6
15
79
7
63
48
3
9
38
1.54
3778--3893
33
3.6
33
73
14
125
38
13
9
37
1.78
3922--3951
14
2.2
13
94
5
51
13
3
0
83
0.77

Tables:   1

The End!