Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007145.1 Corchorus capsularis cultivar CVL-1 contig07166, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36751

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13065--13092
3
9.3
3
100
0
56
0
35
0
64
0.94
13507--13550
6
7.3
6
100
0
88
34
0
15
50
1.45
18311--18343
16
2.0
16
94
5
57
84
15
0
0
0.61
18330--18369
21
1.9
21
100
0
80
67
22
0
10
1.20
22280--22310
7
4.6
7
96
4
55
61
0
0
38
0.96
22668--22700
15
2.2
15
100
0
66
54
30
6
9
1.56
23591--23625
13
2.6
14
86
9
54
60
8
5
25
1.49
23620--23660
15
2.8
15
96
3
75
80
0
19
0
0.71
23620--23657
12
2.9
13
88
7
51
81
0
18
0
0.69
24012--24050
20
2.0
20
90
5
62
30
5
41
23
1.76
26014--26044
7
4.4
7
91
0
53
12
38
16
32
1.86
33637--33662
6
4.3
6
100
0
52
30
0
50
19
1.48

Tables:   1

The End!