Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007150.1 Corchorus capsularis cultivar CVL-1 contig07171, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20751

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
203--246
22
2.0
22
95
0
79
25
0
18
56
1.41
687--1125
35
12.9
34
82
10
481
38
9
19
32
1.84
687--1125
66
6.4
65
85
8
483
38
9
19
32
1.84
2671--2719
2
24.5
2
91
0
71
51
4
0
44
1.20
10941--10982
19
2.2
20
83
8
52
2
2
11
83
0.84
13992--14077
24
3.6
24
85
0
118
40
18
17
23
1.91
14430--14470
12
3.5
11
86
6
55
60
2
0
36
1.10
14803--14860
27
2.1
27
87
0
80
32
1
34
31
1.68
15225--15265
22
2.0
22
90
9
68
53
21
0
24
1.46
16010--16048
20
2.0
20
94
0
69
56
5
0
38
1.22
17509--17536
1
28.0
1
100
0
56
100
0
0
0
0.00
17748--17775
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!