Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007155.1 Corchorus capsularis cultivar CVL-1 contig07176, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24720

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1584--1750
27
6.2
27
92
0
271
19
42
17
20
1.89
2558--2592
17
2.1
17
88
0
52
20
14
20
45
1.85
4252--4320
24
2.9
24
82
4
77
15
31
27
24
1.96
6173--6215
19
2.2
20
87
4
61
74
0
23
2
0.93
6160--6223
25
2.7
23
80
9
65
71
0
26
1
0.94
8911--9013
24
4.2
24
85
9
145
31
23
26
19
1.98
8916--9020
50
2.1
50
96
0
192
30
22
27
19
1.98
8985--9140
31
5.2
31
85
2
185
30
24
25
19
1.98
8931--9102
62
3.0
61
82
10
195
30
22
26
20
1.98
9656--9709
2
27.5
2
88
3
83
50
0
1
48
1.11
10044--10101
21
2.7
21
79
10
64
37
12
12
37
1.80
10232--10291
22
2.7
22
78
17
70
35
11
18
35
1.87
11375--11421
22
2.1
22
92
0
76
42
10
10
36
1.74
22408--22459
26
2.0
27
88
3
79
42
5
1
50
1.37

Tables:   1

The End!