Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007156.1 Corchorus capsularis cultivar CVL-1 contig07177, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25486

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--27
2
13.5
2
100
0
54
48
0
0
51
1.00
4630--4661
8
3.9
8
95
4
55
90
0
0
9
0.45
4624--4662
9
4.4
9
90
6
62
89
2
0
7
0.56
4630--4662
17
1.9
17
100
0
66
90
0
0
9
0.44
6739--6772
3
11.3
3
87
0
50
61
5
0
32
1.20
7752--7785
1
34.0
1
100
0
68
100
0
0
0
0.00
13751--13779
3
9.7
3
100
0
58
65
0
0
34
0.93
18512--18555
22
2.0
22
95
0
79
65
4
6
22
1.35
18512--18561
22
2.5
20
87
9
66
64
4
8
24
1.38
18901--18928
6
4.7
6
100
0
56
53
0
14
32
1.41
23815--23902
32
2.9
29
69
22
74
70
0
4
25
1.06
25431--25463
2
17.0
2
93
6
59
51
0
0
48
1.00

Tables:   1

The End!