Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007157.1 Corchorus capsularis cultivar CVL-1 contig07178, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21132

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
789--832
3
14.7
3
100
0
88
0
34
0
65
0.93
1740--1771
16
2.0
16
100
0
64
31
6
18
43
1.75
10188--10247
19
3.0
20
85
7
86
35
18
10
36
1.84
10837--10904
3
22.7
3
100
0
136
0
32
0
67
0.91
15698--15799
51
2.0
51
88
0
150
31
23
14
30
1.94
20385--20516
66
2.0
66
98
0
255
37
4
15
41
1.68

Tables:   1

The End!