Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007159.1 Corchorus capsularis cultivar CVL-1 contig07180, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12980

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6503--6537
18
1.9
18
100
0
70
28
5
5
60
1.43
6519--6552
14
2.4
14
85
0
50
35
2
5
55
1.39
8348--8382
18
2.1
16
89
10
52
28
22
2
45
1.67
8351--8570
24
9.0
24
70
14
137
27
22
4
45
1.72
8585--8839
8
35.0
8
65
22
100
27
21
5
45
1.73
8647--8772
6
18.2
6
68
23
54
30
22
3
43
1.71
8630--8914
14
19.9
14
68
20
121
28
22
4
45
1.72
8585--8914
36
8.9
36
77
11
276
27
21
4
46
1.72
8747--8914
22
7.8
20
72
23
87
27
22
4
46
1.70
8410--8839
16
28.5
16
66
17
117
26
22
5
45
1.73
8971--9004
14
2.4
14
95
0
59
32
20
5
41
1.76
8956--9070
14
7.9
15
69
15
57
26
20
5
46
1.72
8971--9221
22
11.6
22
72
9
167
27
21
5
44
1.75
9259--9312
22
2.5
22
85
11
69
24
24
9
42
1.83

Tables:   1

The End!