Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007165.1 Corchorus capsularis cultivar CVL-1 contig07186, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26289

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3928--3959
16
1.9
17
93
6
57
34
0
0
65
0.93
5058--5094
19
1.9
19
89
10
58
27
13
16
43
1.85
8873--9087
62
3.5
62
84
6
308
31
13
27
27
1.94
15388--15462
27
2.7
28
91
2
116
16
14
26
42
1.86
23078--23114
19
1.9
19
89
10
58
27
10
21
40
1.86
25220--25309
43
2.1
42
83
6
110
24
26
3
45
1.69
25303--25351
14
3.5
14
83
10
64
22
20
6
51
1.69
25366--25399
14
2.4
14
85
0
50
20
20
5
52
1.67
25857--25900
23
2.0
23
90
4
72
22
15
6
54
1.65

Tables:   1

The End!