Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007166.1 Corchorus capsularis cultivar CVL-1 contig07187, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35915

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2497--2521
10
2.5
10
100
0
50
24
8
20
48
1.76
6421--6768
189
1.8
189
93
0
606
24
18
27
29
1.98
15152--15197
5
9.4
5
81
13
60
2
19
0
78
0.86
15147--15186
19
2.1
19
90
9
64
0
22
0
77
0.77
17713--17756
2
21.0
2
86
9
61
47
4
2
45
1.35
22663--22815
48
3.2
47
85
1
180
20
16
26
35
1.95
22710--22817
24
4.5
24
69
0
81
25
16
22
35
1.95
24829--24928
27
3.7
27
80
5
94
21
28
28
23
1.99
24806--24933
54
2.4
54
85
0
157
22
25
27
24
2.00
24955--25069
27
4.3
27
79
8
126
21
24
27
26
1.99
24956--25060
54
1.9
54
86
3
149
21
26
25
25
2.00
24953--25069
54
2.2
54
79
3
146
21
23
28
26
1.99
26359--26404
19
2.4
19
96
0
83
23
15
10
50
1.75
26924--26960
19
1.9
19
100
0
74
37
0
13
48
1.43

Tables:   1

The End!