Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007168.1 Corchorus capsularis cultivar CVL-1 contig07189, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44483

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
336--369
12
2.7
13
90
4
52
58
8
11
20
1.59
1998--2104
33
3.2
33
82
2
126
24
38
28
9
1.86
5807--5857
21
2.4
21
96
0
93
27
23
17
31
1.97
6574--6603
2
15.0
2
92
0
51
46
0
0
53
1.00
6951--6989
20
2.0
20
94
0
69
48
20
0
30
1.50
8115--8214
44
2.4
42
83
5
121
26
12
23
39
1.89
8297--8380
44
1.9
44
85
4
116
26
21
9
42
1.83
10960--11059
44
2.4
42
86
5
130
26
12
22
40
1.88
11135--11223
43
2.1
43
93
0
151
28
19
8
43
1.80
19621--19743
45
2.7
45
89
0
192
41
28
4
26
1.74
39634--39672
20
2.0
20
85
5
53
28
23
5
43
1.75

Tables:   1

The End!