Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007170.1 Corchorus capsularis cultivar CVL-1 contig07191, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26844

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2894--2971
23
3.4
23
83
0
102
21
41
25
11
1.87
2918--2959
13
3.5
13
81
18
63
23
42
23
9
1.83
9361--9427
33
2.1
33
83
8
84
25
35
25
13
1.92
9379--9491
33
3.4
33
85
0
136
23
41
23
12
1.88
15734--15832
15
6.6
15
76
4
92
14
27
22
36
1.92
17056--17160
18
5.8
18
84
2
104
10
20
41
26
1.85
17072--17174
36
2.9
36
83
2
127
9
20
42
27
1.83
17078--17174
18
5.4
18
83
4
97
9
18
45
26
1.80
22674--22743
36
1.9
36
100
0
140
40
17
12
30
1.87
23180--23342
55
3.0
54
90
3
238
33
19
26
20
1.97
23717--23755
17
2.3
17
95
0
69
25
5
41
28
1.77

Tables:   1

The End!