Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007179.1 Corchorus capsularis cultivar CVL-1 contig07200, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35205

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17039--17073
2
17.5
2
100
0
70
51
0
48
0
1.00
17037--17090
10
5.2
10
84
8
54
59
0
40
0
0.98
28503--28549
24
2.0
24
84
16
62
51
6
4
38
1.47
30702--30754
2
27.0
2
84
3
72
47
1
3
47
1.31
32218--32250
17
1.9
17
100
0
66
42
12
27
18
1.85
34655--34689
17
2.1
17
88
0
52
20
14
5
60
1.54

Tables:   1

The End!