Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007184.1 Corchorus capsularis cultivar CVL-1 contig07205, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18562

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2372--2399
2
14.0
2
100
0
56
50
0
0
50
1.00
2584--2678
32
3.0
32
85
0
127
42
21
15
21
1.89
4889--4935
21
2.2
21
96
0
85
55
2
6
36
1.37
18179--18216
19
2.0
19
89
0
58
42
18
18
21
1.90
18326--18371
21
2.1
22
84
4
58
13
39
8
39
1.75
18510--18545
10
4.0
9
89
10
56
75
0
0
25
0.81
18511--18554
17
2.5
17
82
10
54
77
0
2
20
0.88

Tables:   1

The End!