Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007186.1 Corchorus capsularis cultivar CVL-1 contig07207, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56896

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1893--1917
8
3.1
8
100
0
50
24
12
0
64
1.27
1825--1991
78
2.1
78
91
0
262
34
13
1
50
1.50
5096--5128
2
16.5
2
100
0
66
51
0
0
48
1.00
12814--12845
5
6.8
5
92
7
50
81
0
0
18
0.70
15955--15987
15
2.2
15
100
0
66
39
6
15
39
1.72
17494--17802
150
2.1
150
100
0
618
29
15
22
32
1.95
25530--25564
4
8.8
4
93
0
61
74
0
2
22
0.95
35780--35809
3
10.0
3
92
0
51
63
0
3
33
1.11
38125--38173
2
23.5
2
86
12
55
48
8
0
42
1.32
39053--39104
2
27.0
2
84
7
72
46
0
3
50
1.20
39053--39108
25
2.3
25
93
3
96
48
0
3
48
1.19
49991--50016
7
3.7
7
100
0
52
11
42
0
46
1.40

Tables:   1

The End!