Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007191.1 Corchorus capsularis cultivar CVL-1 contig07212, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18963

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1690--1721
6
5.5
6
96
3
57
56
15
0
28
1.40
1718--1762
13
3.5
13
90
3
74
55
8
13
22
1.65
1718--1770
25
2.1
25
89
6
81
58
9
11
20
1.60
6791--6838
21
2.3
21
79
13
55
18
6
6
68
1.32
6792--6839
24
2.0
25
83
4
62
18
6
6
68
1.32
11928--11987
21
2.7
22
70
14
52
16
30
30
23
1.96
14366--14445
42
1.9
42
84
0
106
7
26
41
25
1.81
18560--18604
13
3.5
13
90
3
74
22
13
8
55
1.65
18601--18633
6
5.5
6
100
0
66
30
0
15
54
1.41

Tables:   1

The End!