Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007192.1 Corchorus capsularis cultivar CVL-1 contig07213, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19261

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
104--132
10
2.7
11
89
10
51
13
0
0
86
0.58
100--132
13
2.4
14
90
5
50
15
0
0
84
0.61
205--238
8
4.1
8
85
7
50
23
2
14
58
1.50
1147--1265
33
3.5
33
82
8
134
7
26
42
23
1.81
5631--5699
29
2.3
29
85
2
84
39
39
10
11
1.75
13895--14712
49
16.7
48
78
7
323
22
30
15
31
1.95
14389--14663
48
5.6
48
75
6
212
23
30
15
30
1.95
13898--14630
49
15.0
49
81
4
579
22
31
15
31
1.94

Tables:   1

The End!