Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007193.1 Corchorus capsularis cultivar CVL-1 contig07214, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26199

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7583--7639
28
2.1
27
83
9
71
26
26
14
33
1.94
7589--7773
102
1.8
102
91
0
307
24
24
14
36
1.93
7815--7965
60
2.5
62
87
2
198
22
27
15
34
1.94
11334--11868
197
2.8
196
78
8
504
22
29
15
32
1.95
11728--11841
43
2.5
44
83
11
133
23
32
14
28
1.95
11333--12045
49
14.7
50
79
5
511
23
28
15
32
1.95
11629--11988
189
1.9
190
80
4
429
23
30
15
31
1.95
16205--16323
49
2.4
49
98
0
229
34
15
11
38
1.84
17667--17701
2
17.5
2
87
0
52
45
0
0
54
0.99
22304--22371
32
2.1
32
83
0
82
27
27
26
17
1.98
23046--23070
11
2.3
11
100
0
50
0
44
0
56
0.99
23487--23531
23
2.0
23
100
0
90
8
8
13
68
1.38
24479--24533
24
2.3
24
93
0
92
34
23
25
16
1.95
24560--24646
27
3.3
27
88
1
131
20
42
18
18
1.89

Tables:   1

The End!