Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007197.1 Corchorus capsularis cultivar CVL-1 contig07218, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42958

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16947--16972
6
4.3
6
100
0
52
15
19
0
65
1.27
20399--20423
12
2.1
12
100
0
50
40
8
24
28
1.83
22439--22480
20
2.1
20
100
0
84
11
4
28
54
1.57
22725--22814
45
2.0
45
85
12
123
34
15
22
27
1.94
23495--23519
13
1.9
13
100
0
50
44
0
0
56
0.99
23644--23670
12
2.2
12
100
0
54
70
0
0
29
0.88
25770--25829
30
2.0
30
83
6
77
26
18
16
38
1.92
26704--26752
3
17.0
3
91
8
84
34
0
0
65
0.93
26748--27180
217
2.0
214
86
4
604
40
18
16
24
1.91
37380--37415
15
2.4
15
95
0
63
50
8
19
22
1.74
37762--37865
33
3.4
33
79
17
141
24
25
19
30
1.98
37776--37827
26
2.0
26
100
0
104
26
26
19
26
1.99
42724--42763
20
2.0
20
100
0
80
15
15
25
45
1.84

Tables:   1

The End!