Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007199.1 Corchorus capsularis cultivar CVL-1 contig07220, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44163

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45--97
26
2.0
26
85
7
72
24
16
5
52
1.65
84--147
32
2.0
33
87
3
94
26
18
4
50
1.67
197--335
41
3.4
41
93
3
226
21
20
5
53
1.64
9479--9532
21
2.6
21
76
2
56
20
31
38
9
1.84
29143--29177
14
2.4
15
90
4
54
48
17
5
28
1.69
31658--31725
21
3.3
21
70
15
61
57
25
4
13
1.54

Tables:   1

The End!