Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007208.1 Corchorus capsularis cultivar CVL-1 contig07229, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28123

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2929--2961
17
1.9
17
93
0
57
6
12
6
75
1.16
12991--13058
27
2.5
28
88
7
104
30
13
22
33
1.92
17473--17540
27
2.5
28
85
7
95
30
13
20
35
1.91
24730--24911
95
1.9
95
96
0
337
43
15
14
26
1.85
25338--25391
24
2.2
23
87
9
72
44
0
1
53
1.11
25345--25406
24
2.6
24
74
16
58
48
0
1
50
1.10
25522--25571
21
2.4
21
82
0
64
34
20
8
38
1.82
25718--26154
216
2.0
216
92
2
734
30
10
10
48
1.71
27028--27064
15
2.5
15
95
0
65
24
18
13
43
1.86
27058--27089
15
2.1
16
94
5
57
12
25
18
43
1.85

Tables:   1

The End!