Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007213.1 Corchorus capsularis cultivar CVL-1 contig07234, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35726

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
871--899
11
2.5
12
94
5
51
86
0
0
13
0.58
2400--2504
33
3.2
33
82
2
122
26
10
18
44
1.81
2453--2540
33
2.7
32
83
11
99
28
10
20
40
1.85
2530--2638
33
3.3
33
97
0
209
25
11
18
44
1.84
2981--3039
30
2.0
30
83
6
75
30
16
27
25
1.97
6515--6545
15
2.1
15
93
0
53
19
16
0
64
1.29
6501--6572
24
2.8
25
79
8
65
18
19
1
61
1.43
6595--6681
25
3.7
24
73
17
83
25
21
2
50
1.60
6656--6739
17
5.2
16
66
21
50
22
22
2
52
1.59
6747--6831
14
6.3
13
70
17
66
20
20
5
54
1.65
6801--6847
21
2.2
21
85
7
60
21
19
6
53
1.67
7076--7167
29
3.0
29
84
10
96
20
20
3
55
1.57
7169--7543
38
9.9
38
90
4
537
27
16
6
50
1.69
8177--8208
14
2.3
14
100
0
64
34
12
6
46
1.67
10869--10907
20
2.0
20
89
0
60
41
20
10
28
1.85
13547--13594
20
2.3
21
89
3
71
66
6
8
18
1.39
14321--14356
18
2.0
18
100
0
72
66
11
11
11
1.45
14958--14996
19
2.1
18
90
4
60
30
23
5
41
1.76
19418--19465
20
2.3
21
85
3
62
68
6
6
18
1.32
20196--20231
18
2.1
17
89
5
54
63
8
13
13
1.50
26657--26715
22
2.6
22
78
10
66
10
10
5
74
1.20

Tables:   1

The End!