Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007214.1 Corchorus capsularis cultivar CVL-1 contig07235, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45407

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13616--13922
156
2.0
156
97
0
578
36
14
18
30
1.90
15687--15733
24
2.0
23
84
12
60
17
14
2
65
1.36
18164--18248
33
2.6
33
86
0
125
43
15
8
32
1.76
18264--18366
33
3.1
33
80
0
107
43
19
9
27
1.82
22762--22801
19
2.2
18
86
4
53
27
20
7
45
1.78
27849--28222
69
5.2
69
82
10
423
36
18
19
25
1.95
28029--28185
80
2.0
80
96
0
287
35
21
18
24
1.95
40209--40237
6
4.8
6
100
0
58
34
34
0
31
1.58
41974--42014
20
2.0
20
100
0
82
26
9
29
34
1.88
43145--43180
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!