Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007220.1 Corchorus capsularis cultivar CVL-1 contig07241, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16753

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2049--2080
15
2.1
15
94
0
55
15
21
12
50
1.77
6704--6898
70
2.8
70
92
3
329
27
28
17
26
1.98
7031--7316
47
6.0
47
85
1
374
18
26
21
33
1.96
7365--7406
22
2.0
20
86
13
57
85
4
7
2
0.80
7365--7436
6
11.5
6
73
22
51
80
2
15
1
0.89
7365--7436
17
4.2
17
70
12
58
80
2
15
1
0.89
7614--7672
26
2.2
28
81
6
68
15
22
25
37
1.93

Tables:   1

The End!